560 items found

Tags: Shared Definition

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  • GlossaryTerm

    Bacterial Isolate

    A pure strain of bacteria which has been seperated from a mixed bacterial culture
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  • GlossaryTerm

    Multiple utility

    Whether the system captures information about more than one hazard
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  • GlossaryTerm

    Library Preparation

    Peparing purified DNA for NGS. Fragmentizes long DNA strands and ligates primers and other sequencing related bits.
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  • GlossaryTerm

    Sequence Coverage

    The number of sequence reads in a sequencing project that align to positions that overlap a specific base on a target genome, or the average number of aligned reads that overlap...
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  • GlossaryTerm

    Organisation and management

    An assessment of organisational structures include whether the objectives are relevant and clearly defined and the existence of steering and technical committees whose members...
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  • GlossaryTerm

    Positive Predicted Value (PPV)

    Measures the proportions of positive results in statistics and diagnostic tests that are true positive results
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  • GlossaryTerm

    Multi Locus Sequence Typing (MLST)

    MLST is a nucleotide sequence based approach for the unambiguous characterisation of isolates of bacteria and other organisms via the internet. The aim of MLST is to provide a...
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  • GlossaryTerm

    Chain Of Infection

    A process that begins when an agent leaves its reservoir or host through a portal of exit, and is conveyed by some mode of transmission, then enters through an appropriate...
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  • GlossaryTerm

    Molecular Typing

    The classification of microorganisms on the basis of variation in the genotype, and/ or presence or absence of specific genes (such as those which may contribute to the...
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  • GlossaryTerm

    Reasoner

    Reasoner is a piece of software able to infer logical consequences from a set of asserted facts or axioms. The notion of a reasoner generalizes that of an inference engine, by...
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  • GlossaryTerm

    Zoonotic Disease Agent

    A pathogen or hazard causing a zoonotic disease.
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  • GlossaryTerm

    Population Density

    Definition of Population Density. In biology, populations are groups of individuals belonging to the same species that live in the same region at the same time. Population...
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  • GlossaryTerm

    Sentinel surveillance

    The repeated collection of information from the same selected sites or groups of animals (e.g. veterinary practices, laboratories, herds or animals) to identify changes in the...
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  • GlossaryTerm

    Pattern of disease occurrence: Endemic

    The constant presence of a disease in the population of interest.
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  • GlossaryTerm

    Reporting System

    System made available for reporting data
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  • GlossaryTerm

    Geodata

    Information about geographic locations that is stored in a format that can be used with a geographic information system (GIS).
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  • GlossaryTerm

    Invasive

    An invasive species is an exotic species that establishes and proliferates within an ecosystem, and whose introduction causes or is likely to cause economic or environmental...
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  • GlossaryTerm

    Subtyping

    High discriminatory typing methods used for defining phenotype, genotype, molecular type and cluster type
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  • GlossaryTerm

    Pattern of disease occurrence: Re-emerging

    A previously defined (known) disease that is currently either absent or present at a low level, in the population in a defined geographical area that re-appears or significantly...
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  • GlossaryTerm

    System Agnostics

    Software that runs under any operating system. It may also refer to development tools that support any operating system.
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