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Sequence alignment
An algorithmic approach to find the best matching of consecutive letters in one sequence (text symbols that represent the polymer subunits of DNA or protein sequences) with...-
Shared Definition
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Globalization
The increased interconnectedness and interdependence of peoples and countries, is generally understood to include two interrelated elements: the opening of borders to...-
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Shared Definition
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Whole Genome MLST(WGMLST)
Consist of a fixed set of species specific genes, also including variable and transfeerable loci.-
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Stability and sustainability
The ability to function without failure (reliability), the ability to be operational when needed (availability) and the robustness and ability of the system to be ongoing in the...-
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One Health (OH) Knowledge Base NGS
Cross-domain inventory of currently available data/methods/algorithms/tools/systems linked to existing and novel NextGen bacterial identification (primarily NGS) analysis methods-
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Surveillance Pathway
Describes the steps in the surveillance i.e. design adjustment and optimization of the surveillance programme/system; sample collection; laboratory analysis; data transfer and...-
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Monitoring - Passive
Passive monitoring programme of zoonotic agents or antimicrobial resistance that includes information from diagnostic testing, or a representative selection of this information....-
Food Safety
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Food Safety
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Subspecies
In bacterial taxonomy subgroups of a species that differ in their phenotypic or genotypic characteristics.-
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Descriptive Epidemiological Evidence
Descriptive epidemiological evidence refers to generation of hypotheses concerning the food vehicle of an outbreak by systematic collection of information on outbreak cases,...-
Food Safety
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Food Safety
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In Silico Serotype
The use of one or several molecular methods to derive the serotype (examples PCR and/or sequencing)-
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Shared Definition
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Antibiotic
A substance produced by or derived from a microorganism, which destroys or inhibits the growth of other microorganisms.-
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Food Safety
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Food Safety
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Shared Definition
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Tick Borne Encephalitis
vector-borne zoonotic disease, spread by ticks, can be found in humans, domestic and wild animals-
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Food Safety
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Food Safety
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Knowledge graph
The Knowledge Graph is a knowledge base, i.e. a technology used to store complex structured and unstructured information used by a computer system. Knowledge graph is used by...-
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(surveillance) data harmonization
In the context of epidemiology: Making data from different sources comparable. The processes involved in producing inferentially equivalent data.-
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